Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CYP4F23P-201ENST00000593402 1579 ntBASIC14.89□□□□□ -0.03
SMAD6O43541 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMAD6O43541 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SMAD6O43541 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.89□□□□□ -0.03
SMAD6O43541 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SMAD6O43541 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SMAD6O43541 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMAD6O43541 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMAD6O43541 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMAD6O43541 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.88□□□□□ -0.03
SMAD6O43541 FAM45BP-202ENST00000592932 1624 ntBASIC14.88□□□□□ -0.03
SMAD6O43541 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.88□□□□□ -0.03
SMAD6O43541 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SMAD6O43541 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.88□□□□□ -0.03
SMAD6O43541 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.88□□□□□ -0.03
SMAD6O43541 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.88□□□□□ -0.03
SMAD6O43541 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SMAD6O43541 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.88□□□□□ -0.03
SMAD6O43541 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMAD6O43541 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SMAD6O43541 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 AC005077.2-201ENST00000449786 690 ntBASIC14.88□□□□□ -0.03
SMAD6O43541 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.88□□□□□ -0.03
SMAD6O43541 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.88□□□□□ -0.03
SMAD6O43541 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.88□□□□□ -0.03
SMAD6O43541 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.88□□□□□ -0.03
SMAD6O43541 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.88□□□□□ -0.03
SMAD6O43541 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.88□□□□□ -0.03
SMAD6O43541 AL645939.5-201ENST00000606834 243 ntBASIC14.88□□□□□ -0.03
SMAD6O43541 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMAD6O43541 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.88□□□□□ -0.03
SMAD6O43541 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SMAD6O43541 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.88□□□□□ -0.03
SMAD6O43541 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
SMAD6O43541 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.88□□□□□ -0.03
SMAD6O43541 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SMAD6O43541 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.88□□□□□ -0.03
SMAD6O43541 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMAD6O43541 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.87□□□□□ -0.03
SMAD6O43541 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.87□□□□□ -0.03
SMAD6O43541 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SMAD6O43541 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SMAD6O43541 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SMAD6O43541 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.87□□□□□ -0.03
SMAD6O43541 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.87□□□□□ -0.03
SMAD6O43541 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.87□□□□□ -0.03
SMAD6O43541 AC006122.1-201ENST00000493323 440 ntBASIC14.87□□□□□ -0.03
SMAD6O43541 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.87□□□□□ -0.03
SMAD6O43541 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.87□□□□□ -0.03
SMAD6O43541 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.87□□□□□ -0.03
SMAD6O43541 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.87□□□□□ -0.03
SMAD6O43541 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SMAD6O43541 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.87□□□□□ -0.03
SMAD6O43541 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SMAD6O43541 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SMAD6O43541 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms