Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC24.51■■□□□ 1.51
CUX2O14529 AP000533.1-201ENST00000456143 1177 ntBASIC24.51■■□□□ 1.51
CUX2O14529 DPY19L2P4-201ENST00000479881 442 ntBASIC24.51■■□□□ 1.51
CUX2O14529 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC24.51■■□□□ 1.51
CUX2O14529 AL513523.2-202ENST00000427283 2040 ntBASIC24.51■■□□□ 1.51
CUX2O14529 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CUX2O14529 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CUX2O14529 AC019109.1-201ENST00000401725 1874 ntBASIC24.51■■□□□ 1.51
CUX2O14529 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CUX2O14529 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC24.51■■□□□ 1.51
CUX2O14529 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC24.51■■□□□ 1.51
CUX2O14529 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC24.51■■□□□ 1.51
CUX2O14529 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CUX2O14529 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CUX2O14529 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CUX2O14529 U3.41-201ENST00000408711 219 ntBASIC24.51■■□□□ 1.51
CUX2O14529 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC24.51■■□□□ 1.51
CUX2O14529 AC009517.1-201ENST00000454750 570 ntBASIC24.51■■□□□ 1.51
CUX2O14529 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC24.51■■□□□ 1.51
CUX2O14529 RN7SL788P-201ENST00000460504 316 ntBASIC24.51■■□□□ 1.51
CUX2O14529 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC24.51■■□□□ 1.51
CUX2O14529 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC24.51■■□□□ 1.51
CUX2O14529 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC24.51■■□□□ 1.51
CUX2O14529 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CUX2O14529 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CUX2O14529 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC24.5■■□□□ 1.51
CUX2O14529 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
CUX2O14529 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC24.5■■□□□ 1.51
CUX2O14529 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC24.5■■□□□ 1.51
CUX2O14529 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC24.5■■□□□ 1.51
CUX2O14529 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 RN7SL375P-201ENST00000492442 298 ntBASIC24.5■■□□□ 1.51
CUX2O14529 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC24.5■■□□□ 1.51
CUX2O14529 AL359091.4-201ENST00000610052 409 ntBASIC24.5■■□□□ 1.51
CUX2O14529 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC24.5■■□□□ 1.51
CUX2O14529 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC24.5■■□□□ 1.51
CUX2O14529 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC24.5■■□□□ 1.51
CUX2O14529 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CUX2O14529 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC24.49■■□□□ 1.51
CUX2O14529 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
CUX2O14529 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CUX2O14529 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC24.49■■□□□ 1.51
CUX2O14529 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC24.49■■□□□ 1.51
CUX2O14529 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC24.49■■□□□ 1.51
CUX2O14529 RNU1-80P-201ENST00000459500 161 ntBASIC24.49■■□□□ 1.51
CUX2O14529 AC099328.1-201ENST00000498809 1030 ntBASIC24.49■■□□□ 1.51
CUX2O14529 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC24.49■■□□□ 1.51
CUX2O14529 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC24.49■■□□□ 1.51
CUX2O14529 AL132994.1-201ENST00000554098 400 ntBASIC24.49■■□□□ 1.51
CUX2O14529 MVK-217ENST00000639206 367 ntTSL 5 BASIC24.49■■□□□ 1.51
CUX2O14529 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CUX2O14529 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CUX2O14529 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC24.49■■□□□ 1.51
CUX2O14529 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 BID-213ENST00000615414 2236 ntTSL 5 BASIC24.48■■□□□ 1.51
CUX2O14529 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CUX2O14529 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC24.48■■□□□ 1.51
CUX2O14529 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC24.48■■□□□ 1.51
CUX2O14529 AGGF1P1-201ENST00000509500 2073 ntBASIC24.48■■□□□ 1.51
CUX2O14529 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 OR52M2P-201ENST00000414298 959 ntBASIC24.48■■□□□ 1.51
CUX2O14529 AC079325.1-201ENST00000430386 857 ntBASIC24.48■■□□□ 1.51
CUX2O14529 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CUX2O14529 RPSAP70-201ENST00000504462 864 ntBASIC24.48■■□□□ 1.51
CUX2O14529 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC24.48■■□□□ 1.51
CUX2O14529 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC24.48■■□□□ 1.51
CUX2O14529 PPY-202ENST00000587006 431 ntTSL 3 BASIC24.48■■□□□ 1.51
CUX2O14529 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms