Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COLCA2A8K830 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COLCA2A8K830 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.3□□□□□ -0.6
COLCA2A8K830 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COLCA2A8K830 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
COLCA2A8K830 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COLCA2A8K830 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.3□□□□□ -0.6
COLCA2A8K830 AL928654.5-201ENST00000624831 2501 ntBASIC11.3□□□□□ -0.6
COLCA2A8K830 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
COLCA2A8K830 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
COLCA2A8K830 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.3□□□□□ -0.6
COLCA2A8K830 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
COLCA2A8K830 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
COLCA2A8K830 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
COLCA2A8K830 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 PPP1R26P1-201ENST00000474415 3613 ntBASIC11.29□□□□□ -0.6
COLCA2A8K830 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
COLCA2A8K830 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
COLCA2A8K830 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC11.29□□□□□ -0.6
COLCA2A8K830 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 VENTXP5-201ENST00000523979 775 ntBASIC11.29□□□□□ -0.6
COLCA2A8K830 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.29□□□□□ -0.6
COLCA2A8K830 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC11.29□□□□□ -0.6
COLCA2A8K830 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.29□□□□□ -0.6
COLCA2A8K830 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
COLCA2A8K830 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 PES1-203ENST00000402281 2760 ntTSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 AC009549.1-201ENST00000603468 1686 ntBASIC11.29□□□□□ -0.6
COLCA2A8K830 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.29□□□□□ -0.6
COLCA2A8K830 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.29□□□□□ -0.6
COLCA2A8K830 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
COLCA2A8K830 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
COLCA2A8K830 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
COLCA2A8K830 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
COLCA2A8K830 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
COLCA2A8K830 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 SMCR5-201ENST00000543475 2844 ntBASIC11.28□□□□□ -0.6
COLCA2A8K830 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
COLCA2A8K830 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms