Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 LTB4R2-202ENST00000528054 3092 ntBASIC17.95■□□□□ 0.46
RGPD3A6NKT7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 TBC1D27-202ENST00000424239 1573 ntBASIC17.95■□□□□ 0.46
RGPD3A6NKT7 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 SRPK2P-201ENST00000523408 1100 ntBASIC17.95■□□□□ 0.46
RGPD3A6NKT7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 AC120498.5-201ENST00000561757 299 ntBASIC17.95■□□□□ 0.46
RGPD3A6NKT7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 IFNL3P1-201ENST00000595082 501 ntBASIC17.95■□□□□ 0.46
RGPD3A6NKT7 AL118508.1-201ENST00000613502 2345 ntBASIC17.95■□□□□ 0.46
RGPD3A6NKT7 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC17.95■□□□□ 0.46
RGPD3A6NKT7 AC010503.4-201ENST00000615487 688 ntBASIC17.95■□□□□ 0.46
RGPD3A6NKT7 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RGPD3A6NKT7 AL137077.2-201ENST00000635124 1608 ntBASIC17.94■□□□□ 0.46
RGPD3A6NKT7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 AC093106.1-201ENST00000437271 352 ntBASIC17.94■□□□□ 0.46
RGPD3A6NKT7 KRT19P4-201ENST00000443208 943 ntBASIC17.94■□□□□ 0.46
RGPD3A6NKT7 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 RNA5SP420-201ENST00000516997 137 ntBASIC17.94■□□□□ 0.46
RGPD3A6NKT7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 RPL4P6-201ENST00000438116 1304 ntBASIC17.94■□□□□ 0.46
RGPD3A6NKT7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 THAP4-203ENST00000402545 833 ntTSL 5 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 PGK1P2-201ENST00000431702 1214 ntBASIC17.94■□□□□ 0.46
RGPD3A6NKT7 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RGPD3A6NKT7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 SAP18P2-201ENST00000434334 459 ntBASIC17.93■□□□□ 0.46
RGPD3A6NKT7 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RGPD3A6NKT7 YY1P2-201ENST00000438766 948 ntBASIC17.93■□□□□ 0.46
RGPD3A6NKT7 RNASEH2CP1-201ENST00000454281 502 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms