Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 STRCP1-201ENST00000509801 5328 ntBASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 AC111170.3-201ENST00000624282 2464 ntBASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV18A0A075B6X5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 AC040169.1-201ENST00000565382 521 ntBASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 AC000095.1-201ENST00000603208 874 ntBASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV18A0A075B6X5 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 AL627223.1-201ENST00000416693 442 ntBASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 GPS2P2-201ENST00000430745 888 ntBASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms