Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AC072061.1-201ENST00000569710 2234 ntBASIC14.07□□□□□ -0.16
AP4S1Q9Y587 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 KRT8P14-201ENST00000414254 1442 ntBASIC14.07□□□□□ -0.16
AP4S1Q9Y587 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.07□□□□□ -0.16
AP4S1Q9Y587 HSPA8P5-201ENST00000456928 2069 ntBASIC14.06□□□□□ -0.16
AP4S1Q9Y587 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 TOMM22P5-201ENST00000416399 439 ntBASIC14.06□□□□□ -0.16
AP4S1Q9Y587 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.06□□□□□ -0.16
AP4S1Q9Y587 RPL13P2-201ENST00000440687 659 ntBASIC14.06□□□□□ -0.16
AP4S1Q9Y587 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 AP001005.1-201ENST00000571755 1248 ntBASIC14.06□□□□□ -0.16
AP4S1Q9Y587 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 AC018529.1-201ENST00000613063 361 ntBASIC14.06□□□□□ -0.16
AP4S1Q9Y587 MIR6069-201ENST00000620069 79 ntBASIC14.06□□□□□ -0.16
AP4S1Q9Y587 AC055717.3-201ENST00000622967 595 ntBASIC14.06□□□□□ -0.16
AP4S1Q9Y587 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 AC104109.2-201ENST00000602919 1418 ntBASIC14.06□□□□□ -0.16
AP4S1Q9Y587 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.06□□□□□ -0.16
AP4S1Q9Y587 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 RNA5SP419-201ENST00000515908 135 ntBASIC14.05□□□□□ -0.16
AP4S1Q9Y587 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 AC145285.3-201ENST00000564603 959 ntBASIC14.05□□□□□ -0.16
AP4S1Q9Y587 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.05□□□□□ -0.16
AP4S1Q9Y587 AL445228.2-201ENST00000605589 952 ntBASIC14.05□□□□□ -0.16
AP4S1Q9Y587 RN7SL828P-201ENST00000607615 303 ntBASIC14.05□□□□□ -0.16
AP4S1Q9Y587 MIR6074-201ENST00000612054 107 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms