Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 AC055717.3-201ENST00000622967 595 ntBASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 AF228730.6-201ENST00000641497 218 ntBASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 AC084121.3-201ENST00000641716 218 ntBASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RCL1Q9Y2P8 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AC004066.1-201ENST00000502488 802 ntBASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AC003101.2-201ENST00000612557 442 ntBASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AC018529.1-201ENST00000613063 361 ntBASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.18□□□□□ -0.46
RCL1Q9Y2P8 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 AL365181.3-201ENST00000605886 3222 ntBASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 AL137783.1-201ENST00000623494 1896 ntBASIC12.17□□□□□ -0.46
RCL1Q9Y2P8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms