Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AC004898.1-201ENST00000451057 766 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AC055811.4-201ENST00000624039 1754 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 KRT8P4-201ENST00000509735 1454 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 FGD5P1-202ENST00000614866 2498 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 AC099063.4-201ENST00000641099 1602 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 SLC25A24P2-201ENST00000415059 510 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 FNTAP2-201ENST00000430308 634 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 AKR7A2P1-201ENST00000460134 915 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 AL391280.1-201ENST00000506969 1062 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 AC020914.3-201ENST00000594712 304 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 AC244157.2-201ENST00000616239 1006 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 CICP24-201ENST00000605464 2705 ntBASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA1Q9UND3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 REXO1L5P-201ENST00000622260 2098 ntBASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms