Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 RPL18P13-201ENST00000478088 569 ntBASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 MARK2P5-201ENST00000507649 634 ntBASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 AC090164.2-201ENST00000611487 516 ntBASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 AL136295.7-201ENST00000619226 1200 ntBASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLCF1Q9UBD9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 DBET-201ENST00000630918 3363 ntBASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 MRPL37P1-201ENST00000592451 1337 ntBASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 AC013726.1-201ENST00000563747 2285 ntBASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 CICP23-201ENST00000605013 2741 ntBASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 AL008707.1-201ENST00000422498 534 ntBASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 VDAC1P1-201ENST00000439229 848 ntBASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 AC104073.2-201ENST00000453737 312 ntBASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 IGHJ2P-201ENST00000454480 60 ntBASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.15□□□□□ -0.3
CLCF1Q9UBD9 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms