Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 AC104581.4-201ENST00000623126 3052 ntBASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DNMT3BQ9UBC3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 AC018629.1-201ENST00000623381 1736 ntBASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 AC078991.1-201ENST00000437297 610 ntBASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 NPM1P43-201ENST00000558669 786 ntBASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 AL009178.2-201ENST00000597278 2719 ntBASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DNMT3BQ9UBC3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 AGAP7P-201ENST00000582299 2062 ntBASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 AGAP14-201ENST00000624701 2060 ntBASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 LINC01101-201ENST00000622953 1884 ntBASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 KRT18P36-201ENST00000411618 1276 ntBASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 PHBP15-201ENST00000574228 665 ntBASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 RN7SL736P-201ENST00000613111 269 ntBASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 LINC01783-202ENST00000614408 828 ntBASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 BX284668.2-205ENST00000619677 828 ntBASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DNMT3BQ9UBC3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms