Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHD8Q9HCK8 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 FTH1P18-201ENST00000412071 549 ntBASIC13.38□□□□□ -0.27
CHD8Q9HCK8 LINC00265-2P-201ENST00000413372 782 ntBASIC13.38□□□□□ -0.27
CHD8Q9HCK8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 KRT19P4-201ENST00000443208 943 ntBASIC13.38□□□□□ -0.27
CHD8Q9HCK8 UGT1A12P-201ENST00000447084 853 ntBASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 ODCP-201ENST00000459650 1639 ntBASIC13.38□□□□□ -0.27
CHD8Q9HCK8 RN7SL487P-201ENST00000468140 344 ntBASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AL353708.1-201ENST00000567904 1257 ntBASIC13.38□□□□□ -0.27
CHD8Q9HCK8 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
CHD8Q9HCK8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AC000078.1-201ENST00000420617 682 ntBASIC13.37□□□□□ -0.27
CHD8Q9HCK8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 HNRNPA1P59-201ENST00000430583 918 ntBASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AC005722.1-201ENST00000431878 964 ntBASIC13.37□□□□□ -0.27
CHD8Q9HCK8 RN7SL788P-201ENST00000460504 316 ntBASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 BOLA3P2-201ENST00000586496 323 ntBASIC13.37□□□□□ -0.27
CHD8Q9HCK8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHD8Q9HCK8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms