Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 MTND6P24-201ENST00000440466 518 ntBASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 AC090505.1-201ENST00000430515 1834 ntBASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.41□□□□□ -0.1
KLHL4Q9C0H6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 FAM90A12P-201ENST00000519497 2375 ntBASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 FAM90A24P-201ENST00000520792 2369 ntBASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 AC068760.1-201ENST00000493579 1953 ntBASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 AL607033.1-201ENST00000623900 1599 ntBASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 AC131212.3-201ENST00000624087 4219 ntBASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 AC073592.8-201ENST00000624126 511 ntBASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 AL354702.1-201ENST00000442006 1960 ntBASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KLHL4Q9C0H6 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
KLHL4Q9C0H6 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 PEG13-201ENST00000631594 5667 ntBASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 REXO1L4P-201ENST00000605109 1937 ntBASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.39□□□□□ -0.11
KLHL4Q9C0H6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms