Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AL357373.1-201ENST00000394974 322 ntBASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AL807761.2-201ENST00000422849 729 ntBASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2OQ9C0C9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 AL357563.1-201ENST00000404728 395 ntBASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 KRT17P4-201ENST00000429445 819 ntBASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 GCSHP3-201ENST00000431120 391 ntBASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 RN7SL396P-201ENST00000471086 295 ntBASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 RN7SL81P-201ENST00000493781 261 ntBASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 AC015909.3-201ENST00000572855 1794 ntBASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE2OQ9C0C9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2OQ9C0C9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms