Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 AL645937.2-201ENST00000396808 931 ntBASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 MIR6752-201ENST00000618442 71 ntBASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 AL138799.1-201ENST00000448213 1675 ntBASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AMBRA1Q9C0C7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 OR8S1-201ENST00000310194 1080 ntBASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 AC007274.1-201ENST00000439805 662 ntBASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 SPDYE18-201ENST00000510091 1050 ntBASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 AC107373.2-201ENST00000607735 490 ntBASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 SBF1P1-201ENST00000444527 5631 ntBASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AMBRA1Q9C0C7 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms