Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RSPO3Q9BXY4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 TERF1P3-201ENST00000505638 1227 ntBASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 SLC25A47P1-201ENST00000531577 414 ntBASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 AC073413.1-201ENST00000603927 732 ntBASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 AC015818.8-201ENST00000587907 1519 ntBASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO3Q9BXY4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO3Q9BXY4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 FAM197Y7-201ENST00000432892 766 ntBASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 AC011495.1-201ENST00000498085 584 ntBASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.52□□□□□ -0.25
RSPO3Q9BXY4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms