Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 AP3S2-216ENST00000617003 1561 ntBASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SSBP4Q9BWG4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 MRPL3P1-201ENST00000400109 1033 ntBASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 SPDYE17-201ENST00000412399 783 ntBASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 MTND2P9-201ENST00000422293 931 ntBASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 AC008147.4-201ENST00000617570 1204 ntBASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 AC004241.5-201ENST00000623870 2448 ntBASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 REXO1L4P-201ENST00000605109 1937 ntBASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 AC007787.1-201ENST00000588095 1583 ntBASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SSBP4Q9BWG4 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SSBP4Q9BWG4 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SSBP4Q9BWG4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SSBP4Q9BWG4 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SSBP4Q9BWG4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SSBP4Q9BWG4 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms