Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 AC148477.8-201ENST00000624298 468 ntBASIC14.02□□□□□ -0.17
NR1H4Q96RI1 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NR1H4Q96RI1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 AL136982.4-201ENST00000437689 1740 ntBASIC14.01□□□□□ -0.17
NR1H4Q96RI1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 AC011840.2-201ENST00000563063 1520 ntBASIC14.01□□□□□ -0.17
NR1H4Q96RI1 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 KRT18P67-201ENST00000432816 1264 ntBASIC14.01□□□□□ -0.17
NR1H4Q96RI1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 AL031432.2-201ENST00000566714 459 ntBASIC14.01□□□□□ -0.17
NR1H4Q96RI1 AL928711.1-201ENST00000570165 459 ntBASIC14.01□□□□□ -0.17
NR1H4Q96RI1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 MIR4751-201ENST00000578027 74 ntBASIC14.01□□□□□ -0.17
NR1H4Q96RI1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR1H4Q96RI1 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NR1H4Q96RI1 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NR1H4Q96RI1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NR1H4Q96RI1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14□□□□□ -0.17
NR1H4Q96RI1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14□□□□□ -0.17
NR1H4Q96RI1 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14□□□□□ -0.17
NR1H4Q96RI1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NR1H4Q96RI1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
NR1H4Q96RI1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14□□□□□ -0.17
NR1H4Q96RI1 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14□□□□□ -0.17
NR1H4Q96RI1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14□□□□□ -0.17
NR1H4Q96RI1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14□□□□□ -0.17
NR1H4Q96RI1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 PRYP6-201ENST00000514804 343 ntBASIC14□□□□□ -0.17
NR1H4Q96RI1 AC109635.5-201ENST00000533593 962 ntBASIC14□□□□□ -0.17
NR1H4Q96RI1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14□□□□□ -0.17
NR1H4Q96RI1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14□□□□□ -0.17
NR1H4Q96RI1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 AL645728.2-201ENST00000641974 660 ntBASIC14□□□□□ -0.17
NR1H4Q96RI1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 AC092053.3-201ENST00000641308 4975 ntBASIC14□□□□□ -0.17
NR1H4Q96RI1 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms