Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 SALL4P5-201ENST00000419001 1760 ntBASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 FAM86GP-201ENST00000448322 971 ntBASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHAMP1Q96JM3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.21■□□□□ 0.34
CHAMP1Q96JM3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CHAMP1Q96JM3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHAMP1Q96JM3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 AC098850.1-201ENST00000419919 790 ntBASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 AP001582.1-201ENST00000525856 295 ntBASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHAMP1Q96JM3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AC022144.1-201ENST00000602255 1580 ntBASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AC020658.7-201ENST00000624274 2442 ntBASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 SPDYE19P-201ENST00000338590 713 ntBASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHAMP1Q96JM3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms