Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ACTBP8-201ENST00000403258 1108 ntBASIC15.17■□□□□ 0.02
PTCD2Q8WV60 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 TLE1P1-201ENST00000422965 589 ntBASIC15.17■□□□□ 0.02
PTCD2Q8WV60 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 CTBP2P5-201ENST00000454986 1264 ntBASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 MIR6805-201ENST00000615055 62 ntBASIC15.17■□□□□ 0.02
PTCD2Q8WV60 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 BX640514.1-201ENST00000583223 1918 ntBASIC15.16■□□□□ 0.02
PTCD2Q8WV60 OR2I1P-210ENST00000642037 4691 ntBASIC15.16■□□□□ 0.02
PTCD2Q8WV60 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AL512637.1-201ENST00000439523 1231 ntBASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AL022328.1-201ENST00000610050 478 ntBASIC15.16■□□□□ 0.02
PTCD2Q8WV60 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.16■□□□□ 0.02
PTCD2Q8WV60 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AC015802.1-201ENST00000588104 1449 ntBASIC15.16■□□□□ 0.02
PTCD2Q8WV60 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTCD2Q8WV60 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC007686.3-201ENST00000619017 3487 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms