Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 EEF1DP1-201ENST00000585891 896 ntBASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 AL359183.1-201ENST00000623796 2132 ntBASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDND2Q8NHS1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 MIR1247-201ENST00000408206 136 ntBASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 AC007969.1-201ENST00000433675 447 ntBASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 FAM8A4P-201ENST00000435433 1213 ntBASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 AC006033.1-201ENST00000440505 426 ntBASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 AC245100.3-201ENST00000441281 285 ntBASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 AP006547.1-201ENST00000563435 692 ntBASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 AC103810.3-201ENST00000583567 96 ntBASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDND2Q8NHS1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDND2Q8NHS1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms