Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 MSNP1-201ENST00000511640 1732 ntBASIC8.89□□□□□ -0.99
SVIPQ8NHG7 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 SLC22A24-202ENST00000417740 2098 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 FAM131B-201ENST00000409222 3823 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 MNT-208ENST00000575394 606 ntTSL 4 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 CD2BP2-201ENST00000305596 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 KBTBD3-205ENST00000531837 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 KLF7-203ENST00000421199 3037 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 CD36-222ENST00000538969 1922 ntTSL 5 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 CPEB1-208ENST00000611163 1919 ntTSL 2 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 FAM47DP-201ENST00000402340 3290 ntBASIC8.89□□□□□ -0.99
SVIPQ8NHG7 C22orf46-201ENST00000402966 4975 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 GPR26-201ENST00000284674 7514 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 TBC1D5-210ENST00000429924 2477 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 AC034229.3-201ENST00000606203 2436 ntBASIC8.89□□□□□ -0.99
SVIPQ8NHG7 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SVIPQ8NHG7 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 GRAMD2A-201ENST00000309731 3281 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 BCAS3-201ENST00000390652 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 GPAT2P1-201ENST00000444924 1672 ntBASIC8.88□□□□□ -0.99
SVIPQ8NHG7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 BPI-204ENST00000451435 2857 ntTSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 ATG9A-202ENST00000396761 3799 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 GPR132-201ENST00000329797 3660 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 AC068448.1-201ENST00000623902 3925 ntBASIC8.88□□□□□ -0.99
SVIPQ8NHG7 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 OTOG-201ENST00000342528 4992 ntTSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 AC100793.1-201ENST00000479088 345 ntBASIC8.88□□□□□ -0.99
SVIPQ8NHG7 LINC02515-201ENST00000503677 536 ntTSL 3 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 IPO5-229ENST00000631030 192 ntTSL 5 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 AL031430.1-201ENST00000642067 1039 ntBASIC8.88□□□□□ -0.99
SVIPQ8NHG7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 TAS2R4-201ENST00000247881 2378 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 LINC01484-203ENST00000521128 2361 ntTSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 GOLGA6C-201ENST00000300576 2082 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 EIF4E3-205ENST00000448225 6209 ntTSL 5 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 MYO15A-203ENST00000418233 3411 ntTSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 RIOX2-203ENST00000394198 2341 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 IL4R-202ENST00000395762 3685 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 THAP12P2-201ENST00000489193 2267 ntBASIC8.88□□□□□ -0.99
SVIPQ8NHG7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 LMO3-215ENST00000537304 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 ITGAX-203ENST00000562522 3990 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SVIPQ8NHG7 HAUS8-203ENST00000593360 3176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SVIPQ8NHG7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms