Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 MIR6720-201ENST00000611664 98 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AC232323.1-201ENST00000540724 2099 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AC140479.7-201ENST00000636301 2332 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 AL157407.1-201ENST00000435784 904 ntBASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 AC012441.2-201ENST00000444843 739 ntBASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 AC021723.1-201ENST00000486306 515 ntBASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 AC007663.3-201ENST00000609632 465 ntBASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 OR2I1P-209ENST00000641730 5365 ntBASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAM1L1Q8N609 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
TRAM1L1Q8N609 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAM1L1Q8N609 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAM1L1Q8N609 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TRAM1L1Q8N609 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAM1L1Q8N609 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 AL161772.1-201ENST00000610494 4412 ntBASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 INTS4P1-203ENST00000641008 3683 ntBASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 AL645933.1-201ENST00000440087 609 ntBASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 AC104306.2-201ENST00000451877 341 ntBASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAM1L1Q8N609 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms