Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB43Q86YS6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB43Q86YS6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAB43Q86YS6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB43Q86YS6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB43Q86YS6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB43Q86YS6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB43Q86YS6 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB43Q86YS6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB43Q86YS6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB43Q86YS6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB43Q86YS6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB43Q86YS6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB43Q86YS6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB43Q86YS6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB43Q86YS6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AC015818.8-201ENST00000587907 1519 ntBASIC14.26□□□□□ -0.13
RAB43Q86YS6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AP003680.1-201ENST00000598970 3660 ntBASIC14.26□□□□□ -0.13
RAB43Q86YS6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 GPAA1P2-201ENST00000417923 928 ntBASIC14.26□□□□□ -0.13
RAB43Q86YS6 AC104306.2-201ENST00000451877 341 ntBASIC14.26□□□□□ -0.13
RAB43Q86YS6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AC022616.1-201ENST00000518688 554 ntBASIC14.26□□□□□ -0.13
RAB43Q86YS6 AP001258.2-201ENST00000529891 490 ntBASIC14.26□□□□□ -0.13
RAB43Q86YS6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB43Q86YS6 AC107918.4-201ENST00000641966 3141 ntBASIC14.26□□□□□ -0.13
RAB43Q86YS6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB43Q86YS6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB43Q86YS6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB43Q86YS6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms