Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 KRT8P35-201ENST00000483942 1338 ntBASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 FAM90A12P-201ENST00000519497 2375 ntBASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 FAM90A24P-201ENST00000520792 2369 ntBASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AC026434.2-201ENST00000506094 1078 ntBASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 HSPA8P5-201ENST00000456928 2069 ntBASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 AC073548.1-201ENST00000624088 1882 ntBASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRTM1Q86UE6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 SALL4P5-201ENST00000419001 1760 ntBASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 AL022342.1-201ENST00000400363 863 ntBASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 AL139094.1-201ENST00000405549 1188 ntBASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 NUS1P3-201ENST00000423502 862 ntBASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 AC092865.5-201ENST00000545435 363 ntBASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 AC111170.3-201ENST00000624282 2464 ntBASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRTM1Q86UE6 AL136172.1-201ENST00000598590 1394 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms