Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC152010.1-201ENST00000415779 2006 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 AL354702.1-201ENST00000442006 1960 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 NUS1P3-201ENST00000423502 862 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC004890.2-204ENST00000481968 304 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC023310.3-201ENST00000557027 670 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC100756.1-201ENST00000562736 682 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC138749.3-201ENST00000567691 622 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC093813.1-201ENST00000605066 256 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC116165.1-201ENST00000611806 668 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 BX539320.1-201ENST00000623759 877 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 AC099521.3-201ENST00000624251 2938 ntBASIC14.99□□□□□ -0.01
RAPH1Q70E73 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAPH1Q70E73 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.99□□□□□ -0.01
RAPH1Q70E73 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 AL390955.2-201ENST00000603032 514 ntBASIC14.98□□□□□ -0.01
RAPH1Q70E73 AC023511.2-201ENST00000618803 211 ntBASIC14.98□□□□□ -0.01
RAPH1Q70E73 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 AC092135.3-201ENST00000624151 1846 ntBASIC14.98□□□□□ -0.01
RAPH1Q70E73 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAPH1Q70E73 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.98□□□□□ -0.01
RAPH1Q70E73 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAPH1Q70E73 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAPH1Q70E73 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.97□□□□□ -0.01
RAPH1Q70E73 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RAPH1Q70E73 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAPH1Q70E73 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAPH1Q70E73 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAPH1Q70E73 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms