Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.21■□□□□ 0.02
CASC4Q6P4E1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CASC4Q6P4E1 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AC005840.4-201ENST00000541242 2494 ntBASIC15.2■□□□□ 0.02
CASC4Q6P4E1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AL442647.2-201ENST00000429864 857 ntBASIC15.2■□□□□ 0.02
CASC4Q6P4E1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AC092183.1-201ENST00000469884 875 ntBASIC15.2■□□□□ 0.02
CASC4Q6P4E1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 AC092053.3-201ENST00000641308 4975 ntBASIC15.2■□□□□ 0.02
CASC4Q6P4E1 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASC4Q6P4E1 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 DFFBP1-201ENST00000433250 979 ntBASIC15.19■□□□□ 0.02
CASC4Q6P4E1 AC114812.1-204ENST00000449669 728 ntBASIC15.19■□□□□ 0.02
CASC4Q6P4E1 UGT1A2P-201ENST00000454886 866 ntBASIC15.19■□□□□ 0.02
CASC4Q6P4E1 CYMP-203ENST00000474680 1263 ntBASIC15.19■□□□□ 0.02
CASC4Q6P4E1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 AC124283.3-201ENST00000570869 594 ntBASIC15.19■□□□□ 0.02
CASC4Q6P4E1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 AC133539.2-201ENST00000604757 467 ntBASIC15.19■□□□□ 0.02
CASC4Q6P4E1 AC004233.3-201ENST00000607794 1269 ntBASIC15.19■□□□□ 0.02
CASC4Q6P4E1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 AC007541.1-201ENST00000570282 1469 ntBASIC15.19■□□□□ 0.02
CASC4Q6P4E1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 AC152010.1-201ENST00000415779 2006 ntBASIC15.19■□□□□ 0.02
CASC4Q6P4E1 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms