Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 INE2-201ENST00000630399 1874 ntBASIC17.72■□□□□ 0.43
RNF20Q5VTR2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 AC016694.1-201ENST00000434179 700 ntBASIC17.72■□□□□ 0.43
RNF20Q5VTR2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.72■□□□□ 0.43
RNF20Q5VTR2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 AC104581.4-201ENST00000623126 3052 ntBASIC17.72■□□□□ 0.43
RNF20Q5VTR2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF20Q5VTR2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 HSPA7-201ENST00000445535 1927 ntBASIC17.71■□□□□ 0.43
RNF20Q5VTR2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 AL391280.1-201ENST00000506969 1062 ntBASIC17.71■□□□□ 0.43
RNF20Q5VTR2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 ECM1P1-201ENST00000604092 1279 ntBASIC17.71■□□□□ 0.43
RNF20Q5VTR2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.71■□□□□ 0.43
RNF20Q5VTR2 AC015688.4-201ENST00000580780 1647 ntBASIC17.71■□□□□ 0.43
RNF20Q5VTR2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF20Q5VTR2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
RNF20Q5VTR2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF20Q5VTR2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.71■□□□□ 0.42
RNF20Q5VTR2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 CICP4-201ENST00000447359 2812 ntBASIC17.7■□□□□ 0.42
RNF20Q5VTR2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 RN7SKP175-201ENST00000408472 289 ntBASIC17.7■□□□□ 0.42
RNF20Q5VTR2 CD8B2-202ENST00000417670 633 ntBASIC17.7■□□□□ 0.42
RNF20Q5VTR2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF20Q5VTR2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms