Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.77□□□□□ -0.36
RSPO1Q2MKA7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 ANKRD19P-201ENST00000338192 862 ntBASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 AC010141.1-201ENST00000411585 623 ntBASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 CNN2P10-201ENST00000443067 918 ntBASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 KRT17P8-201ENST00000540749 863 ntBASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 PPY2P-201ENST00000582808 702 ntBASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RSPO1Q2MKA7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms