Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC100827.2-201ENST00000563214 1194 ntBASIC19.16■□□□□ 0.66
CCDC27Q2M243 AC005695.3-201ENST00000614522 232 ntBASIC19.16■□□□□ 0.66
CCDC27Q2M243 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 AC007686.3-201ENST00000619017 3487 ntBASIC19.16■□□□□ 0.66
CCDC27Q2M243 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 AC020910.6-201ENST00000623084 1459 ntBASIC19.16■□□□□ 0.66
CCDC27Q2M243 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 MIR1908-201ENST00000410394 80 ntBASIC19.15■□□□□ 0.66
CCDC27Q2M243 ST13P19-201ENST00000442505 1124 ntBASIC19.15■□□□□ 0.66
CCDC27Q2M243 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 AL160314.3-201ENST00000556041 767 ntBASIC19.15■□□□□ 0.66
CCDC27Q2M243 AC005586.2-201ENST00000563946 837 ntBASIC19.15■□□□□ 0.66
CCDC27Q2M243 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
CCDC27Q2M243 AC026748.1-201ENST00000624349 3251 ntBASIC19.15■□□□□ 0.66
CCDC27Q2M243 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC27Q2M243 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC27Q2M243 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC27Q2M243 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC27Q2M243 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CCDC27Q2M243 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC27Q2M243 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC27Q2M243 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 BNIP3P13-201ENST00000599968 566 ntBASIC19.14■□□□□ 0.65
CCDC27Q2M243 AC009884.2-201ENST00000603110 324 ntBASIC19.14■□□□□ 0.65
CCDC27Q2M243 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 AL023803.2-201ENST00000620080 638 ntBASIC19.14■□□□□ 0.65
CCDC27Q2M243 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 KRT8P29-201ENST00000420409 1371 ntBASIC19.14■□□□□ 0.65
CCDC27Q2M243 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 AC018735.1-201ENST00000437208 1502 ntBASIC19.14■□□□□ 0.65
CCDC27Q2M243 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC27Q2M243 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC27Q2M243 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC27Q2M243 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC27Q2M243 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms