Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 RN7SL163P-201ENST00000583100 276 ntBASIC18.13■□□□□ 0.49
ATP2B3Q16720 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 AL008718.2-201ENST00000609206 1313 ntBASIC18.13■□□□□ 0.49
ATP2B3Q16720 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATP2B3Q16720 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2B3Q16720 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 AC012441.2-201ENST00000444843 739 ntBASIC18.12■□□□□ 0.49
ATP2B3Q16720 AC005077.2-201ENST00000449786 690 ntBASIC18.12■□□□□ 0.49
ATP2B3Q16720 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 AC022217.1-201ENST00000521069 738 ntBASIC18.12■□□□□ 0.49
ATP2B3Q16720 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 AC005962.1-201ENST00000584100 773 ntBASIC18.12■□□□□ 0.49
ATP2B3Q16720 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP2B3Q16720 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2B3Q16720 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.11■□□□□ 0.49
ATP2B3Q16720 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2B3Q16720 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 AL157407.1-201ENST00000435784 904 ntBASIC18.11■□□□□ 0.49
ATP2B3Q16720 AL035414.1-201ENST00000451327 857 ntBASIC18.11■□□□□ 0.49
ATP2B3Q16720 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2B3Q16720 NDUFV2P1-201ENST00000596415 907 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms