Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SSBP1Q04837 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SSBP1Q04837 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SSBP1Q04837 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SSBP1Q04837 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 KRT18P32-201ENST00000424695 1287 ntBASIC12.56□□□□□ -0.4
SSBP1Q04837 AC136604.1-202ENST00000425471 771 ntBASIC12.56□□□□□ -0.4
SSBP1Q04837 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.56□□□□□ -0.4
SSBP1Q04837 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP1Q04837 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSBP1Q04837 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.56□□□□□ -0.4
SSBP1Q04837 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SSBP1Q04837 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SSBP1Q04837 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SSBP1Q04837 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SSBP1Q04837 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP1Q04837 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP1Q04837 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SSBP1Q04837 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.56□□□□□ -0.4
SSBP1Q04837 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.56□□□□□ -0.4
SSBP1Q04837 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP1Q04837 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 SALL4P5-201ENST00000419001 1760 ntBASIC12.56□□□□□ -0.4
SSBP1Q04837 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.56□□□□□ -0.4
SSBP1Q04837 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSBP1Q04837 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP1Q04837 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSBP1Q04837 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 AC015688.4-201ENST00000580780 1647 ntBASIC12.55□□□□□ -0.4
SSBP1Q04837 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP1Q04837 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
SSBP1Q04837 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP1Q04837 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SSBP1Q04837 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
SSBP1Q04837 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
SSBP1Q04837 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.55□□□□□ -0.4
SSBP1Q04837 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.55□□□□□ -0.4
SSBP1Q04837 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
SSBP1Q04837 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
SSBP1Q04837 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.55□□□□□ -0.4
SSBP1Q04837 RN7SL510P-201ENST00000581311 263 ntBASIC12.55□□□□□ -0.4
SSBP1Q04837 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSBP1Q04837 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SSBP1Q04837 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SSBP1Q04837 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.55□□□□□ -0.4
SSBP1Q04837 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 AL157996.1-201ENST00000624684 2299 ntBASIC12.55□□□□□ -0.4
SSBP1Q04837 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP1Q04837 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSBP1Q04837 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.55□□□□□ -0.4
SSBP1Q04837 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms