Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AP000842.3-202ENST00000569238 1080 ntBASIC12.78□□□□□ -0.36
AP3S2P59780 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 AP002472.1-201ENST00000577490 586 ntBASIC12.78□□□□□ -0.36
AP3S2P59780 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.78□□□□□ -0.36
AP3S2P59780 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.78□□□□□ -0.36
AP3S2P59780 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
AP3S2P59780 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
AP3S2P59780 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
AP3S2P59780 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.77□□□□□ -0.36
AP3S2P59780 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
AP3S2P59780 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 MYADML-201ENST00000474610 2147 ntBASIC12.77□□□□□ -0.36
AP3S2P59780 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
AP3S2P59780 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
AP3S2P59780 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.77□□□□□ -0.36
AP3S2P59780 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.77□□□□□ -0.36
AP3S2P59780 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.77□□□□□ -0.36
AP3S2P59780 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
AP3S2P59780 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AP3S2P59780 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 MIR346-201ENST00000362234 95 ntBASIC12.77□□□□□ -0.37
AP3S2P59780 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
AP3S2P59780 AL353705.2-201ENST00000428243 662 ntBASIC12.77□□□□□ -0.37
AP3S2P59780 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
AP3S2P59780 HIST3H2BA-201ENST00000436555 524 ntBASIC12.77□□□□□ -0.37
AP3S2P59780 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S2P59780 AC074386.1-202ENST00000463561 864 ntBASIC12.77□□□□□ -0.37
AP3S2P59780 AC004066.1-201ENST00000502488 802 ntBASIC12.77□□□□□ -0.37
AP3S2P59780 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.77□□□□□ -0.37
AP3S2P59780 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.77□□□□□ -0.37
AP3S2P59780 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S2P59780 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.77□□□□□ -0.37
AP3S2P59780 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S2P59780 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.77□□□□□ -0.37
AP3S2P59780 FAM215A-202ENST00000632077 792 ntBASIC12.77□□□□□ -0.37
AP3S2P59780 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
AP3S2P59780 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S2P59780 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.77□□□□□ -0.37
AP3S2P59780 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.77□□□□□ -0.37
AP3S2P59780 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AP3S2P59780 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms