Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXG1P55316 PCDHA3-202ENST00000532566 4594 ntBASIC12.96□□□□□ -0.33
FOXG1P55316 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXG1P55316 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
FOXG1P55316 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
FOXG1P55316 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXG1P55316 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.96□□□□□ -0.33
FOXG1P55316 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
FOXG1P55316 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXG1P55316 AC103988.2-201ENST00000561804 725 ntBASIC12.96□□□□□ -0.33
FOXG1P55316 AC100827.2-201ENST00000563214 1194 ntBASIC12.96□□□□□ -0.33
FOXG1P55316 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.96□□□□□ -0.33
FOXG1P55316 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 AC243960.2-201ENST00000600996 747 ntBASIC12.96□□□□□ -0.33
FOXG1P55316 AC007663.3-201ENST00000609632 465 ntBASIC12.96□□□□□ -0.33
FOXG1P55316 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
FOXG1P55316 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
FOXG1P55316 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
FOXG1P55316 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
FOXG1P55316 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXG1P55316 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.96□□□□□ -0.34
FOXG1P55316 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
FOXG1P55316 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXG1P55316 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXG1P55316 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
FOXG1P55316 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXG1P55316 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.96□□□□□ -0.34
FOXG1P55316 AC113367.3-201ENST00000508316 1912 ntBASIC12.96□□□□□ -0.34
FOXG1P55316 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.96□□□□□ -0.34
FOXG1P55316 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXG1P55316 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
FOXG1P55316 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 AC139712.1-201ENST00000378256 1875 ntBASIC12.95□□□□□ -0.34
FOXG1P55316 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.95□□□□□ -0.34
FOXG1P55316 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.95□□□□□ -0.34
FOXG1P55316 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 AL590440.2-201ENST00000641973 1595 ntBASIC12.95□□□□□ -0.34
FOXG1P55316 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
FOXG1P55316 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.95□□□□□ -0.34
FOXG1P55316 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXG1P55316 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
FOXG1P55316 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
FOXG1P55316 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
FOXG1P55316 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
FOXG1P55316 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.95□□□□□ -0.34
FOXG1P55316 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXG1P55316 POM121L10P-201ENST00000436994 1285 ntBASIC12.95□□□□□ -0.34
FOXG1P55316 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.95□□□□□ -0.34
FOXG1P55316 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.95□□□□□ -0.34
FOXG1P55316 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.95□□□□□ -0.34
FOXG1P55316 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.95□□□□□ -0.34
FOXG1P55316 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
FOXG1P55316 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
FOXG1P55316 MIR4525-201ENST00000580000 75 ntBASIC12.95□□□□□ -0.34
FOXG1P55316 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.95□□□□□ -0.34
FOXG1P55316 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.95□□□□□ -0.34
FOXG1P55316 AC022748.3-201ENST00000621828 275 ntBASIC12.95□□□□□ -0.34
FOXG1P55316 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.95□□□□□ -0.34
FOXG1P55316 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXG1P55316 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXG1P55316 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
FOXG1P55316 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
FOXG1P55316 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
FOXG1P55316 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms