Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.86□□□□□ -0.19
EFNA3P52797 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
EFNA3P52797 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
EFNA3P52797 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
EFNA3P52797 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 KRT8P29-201ENST00000420409 1371 ntBASIC13.85□□□□□ -0.19
EFNA3P52797 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
EFNA3P52797 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 DPM3-202ENST00000368399 517 ntBASIC13.85□□□□□ -0.19
EFNA3P52797 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
EFNA3P52797 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.85□□□□□ -0.19
EFNA3P52797 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 AC016700.1-201ENST00000429424 312 ntBASIC13.85□□□□□ -0.19
EFNA3P52797 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.85□□□□□ -0.19
EFNA3P52797 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.85□□□□□ -0.19
EFNA3P52797 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.85□□□□□ -0.19
EFNA3P52797 AC091804.1-201ENST00000486888 567 ntBASIC13.85□□□□□ -0.19
EFNA3P52797 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.85□□□□□ -0.19
EFNA3P52797 ACTG1P17-201ENST00000558391 1119 ntBASIC13.85□□□□□ -0.19
EFNA3P52797 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.85□□□□□ -0.19
EFNA3P52797 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.85□□□□□ -0.19
EFNA3P52797 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.85□□□□□ -0.19
EFNA3P52797 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 AC005324.6-201ENST00000587972 613 ntBASIC13.85□□□□□ -0.19
EFNA3P52797 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.85□□□□□ -0.19
EFNA3P52797 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.85□□□□□ -0.19
EFNA3P52797 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
EFNA3P52797 AL139099.5-201ENST00000635274 300 ntBASIC13.85□□□□□ -0.19
EFNA3P52797 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.85□□□□□ -0.19
EFNA3P52797 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
EFNA3P52797 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.85□□□□□ -0.19
EFNA3P52797 AC006504.5-208ENST00000588784 2401 ntBASIC13.85□□□□□ -0.19
EFNA3P52797 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
EFNA3P52797 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
EFNA3P52797 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.85□□□□□ -0.19
EFNA3P52797 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.85□□□□□ -0.19
EFNA3P52797 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
EFNA3P52797 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
EFNA3P52797 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
EFNA3P52797 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.84□□□□□ -0.19
EFNA3P52797 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.84□□□□□ -0.19
EFNA3P52797 AL590440.2-201ENST00000641973 1595 ntBASIC13.84□□□□□ -0.19
EFNA3P52797 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.84□□□□□ -0.19
EFNA3P52797 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.84□□□□□ -0.19
EFNA3P52797 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.84□□□□□ -0.19
EFNA3P52797 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.84□□□□□ -0.19
EFNA3P52797 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.84□□□□□ -0.19
EFNA3P52797 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.84□□□□□ -0.19
EFNA3P52797 VDAC1P1-201ENST00000439229 848 ntBASIC13.84□□□□□ -0.19
EFNA3P52797 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.84□□□□□ -0.19
EFNA3P52797 AL645933.1-201ENST00000440087 609 ntBASIC13.84□□□□□ -0.19
EFNA3P52797 AC104073.2-201ENST00000453737 312 ntBASIC13.84□□□□□ -0.19
EFNA3P52797 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 BX284668.4-201ENST00000453917 508 ntBASIC13.84□□□□□ -0.19
EFNA3P52797 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
EFNA3P52797 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.84□□□□□ -0.19
EFNA3P52797 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.84□□□□□ -0.19
EFNA3P52797 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
EFNA3P52797 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
EFNA3P52797 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms