Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCA2P51587 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCA2P51587 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
BRCA2P51587 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.05■□□□□ 0.16
BRCA2P51587 AL157823.1-201ENST00000403727 628 ntBASIC16.05■□□□□ 0.16
BRCA2P51587 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.05■□□□□ 0.16
BRCA2P51587 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC16.05■□□□□ 0.16
BRCA2P51587 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCA2P51587 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.05■□□□□ 0.16
BRCA2P51587 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.05■□□□□ 0.16
BRCA2P51587 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.05■□□□□ 0.16
BRCA2P51587 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCA2P51587 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCA2P51587 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCA2P51587 AC022080.1-201ENST00000366255 781 ntBASIC16.05■□□□□ 0.16
BRCA2P51587 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 AL035414.1-201ENST00000451327 857 ntBASIC16.05■□□□□ 0.16
BRCA2P51587 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.05■□□□□ 0.16
BRCA2P51587 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC16.05■□□□□ 0.16
BRCA2P51587 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 AC117503.4-201ENST00000623229 1418 ntBASIC16.05■□□□□ 0.16
BRCA2P51587 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BRCA2P51587 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.04■□□□□ 0.16
BRCA2P51587 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
BRCA2P51587 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BRCA2P51587 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 VENTXP3-201ENST00000546480 773 ntBASIC16.04■□□□□ 0.16
BRCA2P51587 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 HNRNPA1P16-201ENST00000575692 955 ntBASIC16.04■□□□□ 0.16
BRCA2P51587 AC021321.1-201ENST00000607397 1113 ntBASIC16.04■□□□□ 0.16
BRCA2P51587 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BRCA2P51587 KRT8P6-201ENST00000399259 1207 ntBASIC16.04■□□□□ 0.16
BRCA2P51587 KRT18P4-201ENST00000422599 1288 ntBASIC16.04■□□□□ 0.16
BRCA2P51587 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.04■□□□□ 0.16
BRCA2P51587 ALG1L7P-201ENST00000502317 768 ntBASIC16.04■□□□□ 0.16
BRCA2P51587 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.04■□□□□ 0.16
BRCA2P51587 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.04■□□□□ 0.16
BRCA2P51587 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC16.04■□□□□ 0.16
BRCA2P51587 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 AC120498.5-201ENST00000561757 299 ntBASIC16.04■□□□□ 0.16
BRCA2P51587 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.04■□□□□ 0.16
BRCA2P51587 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.04■□□□□ 0.16
BRCA2P51587 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRCA2P51587 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCA2P51587 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.03■□□□□ 0.16
BRCA2P51587 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
BRCA2P51587 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCA2P51587 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCA2P51587 AL080243.1-201ENST00000423293 1060 ntBASIC16.03■□□□□ 0.16
BRCA2P51587 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
BRCA2P51587 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC16.03■□□□□ 0.16
BRCA2P51587 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC16.03■□□□□ 0.16
BRCA2P51587 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC16.03■□□□□ 0.16
BRCA2P51587 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCA2P51587 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCA2P51587 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.03■□□□□ 0.16
BRCA2P51587 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
BRCA2P51587 AL050341.2-201ENST00000567508 1541 ntBASIC16.03■□□□□ 0.16
BRCA2P51587 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.03■□□□□ 0.16
BRCA2P51587 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.03■□□□□ 0.16
BRCA2P51587 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.03■□□□□ 0.16
BRCA2P51587 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCA2P51587 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRCA2P51587 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRCA2P51587 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms