Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 AC232323.1-201ENST00000540724 2099 ntBASIC15.67■□□□□ 0.1
TUBP50607 ACE3P-201ENST00000423435 1973 ntBASIC15.67■□□□□ 0.1
TUBP50607 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBP50607 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TUBP50607 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TUBP50607 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBP50607 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 MIR663B-201ENST00000408361 115 ntBASIC15.66■□□□□ 0.1
TUBP50607 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 AC006033.1-201ENST00000440505 426 ntBASIC15.66■□□□□ 0.1
TUBP50607 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.66■□□□□ 0.1
TUBP50607 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBP50607 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.66■□□□□ 0.1
TUBP50607 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.66■□□□□ 0.1
TUBP50607 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.66■□□□□ 0.1
TUBP50607 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.66■□□□□ 0.1
TUBP50607 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TUBP50607 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBP50607 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
TUBP50607 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TUBP50607 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TUBP50607 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBP50607 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBP50607 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 KRT8P4-201ENST00000509735 1454 ntBASIC15.65■□□□□ 0.1
TUBP50607 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBP50607 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBP50607 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.65■□□□□ 0.1
TUBP50607 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.65■□□□□ 0.1
TUBP50607 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.65■□□□□ 0.1
TUBP50607 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBP50607 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.65■□□□□ 0.1
TUBP50607 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.65■□□□□ 0.1
TUBP50607 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TUBP50607 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.65■□□□□ 0.1
TUBP50607 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBP50607 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.65■□□□□ 0.1
TUBP50607 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.65■□□□□ 0.1
TUBP50607 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TUBP50607 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TUBP50607 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.65■□□□□ 0.1
TUBP50607 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms