Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.58□□□□□ -0.24
CENPAP49450 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CENPAP49450 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 AL157414.3-201ENST00000624276 1954 ntBASIC13.58□□□□□ -0.24
CENPAP49450 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CENPAP49450 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CENPAP49450 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.58□□□□□ -0.24
CENPAP49450 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 AL805961.2-201ENST00000642139 4817 ntBASIC13.57□□□□□ -0.24
CENPAP49450 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 BASP1P1-201ENST00000430708 665 ntBASIC13.57□□□□□ -0.24
CENPAP49450 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.57□□□□□ -0.24
CENPAP49450 AC009477.1-201ENST00000452936 217 ntBASIC13.57□□□□□ -0.24
CENPAP49450 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.57□□□□□ -0.24
CENPAP49450 FAM86LP-201ENST00000478302 853 ntBASIC13.57□□□□□ -0.24
CENPAP49450 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.57□□□□□ -0.24
CENPAP49450 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
CENPAP49450 AC104794.3-201ENST00000566840 1248 ntBASIC13.57□□□□□ -0.24
CENPAP49450 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CENPAP49450 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CENPAP49450 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CENPAP49450 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CENPAP49450 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CENPAP49450 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CENPAP49450 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CENPAP49450 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms