Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.03□□□□□ -0.16
RFX3P48380 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.03□□□□□ -0.16
RFX3P48380 AC114812.1-204ENST00000449669 728 ntBASIC14.03□□□□□ -0.16
RFX3P48380 AC093433.1-201ENST00000458048 571 ntBASIC14.03□□□□□ -0.16
RFX3P48380 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.03□□□□□ -0.16
RFX3P48380 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RFX3P48380 AC011495.1-201ENST00000498085 584 ntBASIC14.03□□□□□ -0.16
RFX3P48380 AP005018.1-201ENST00000525475 301 ntBASIC14.03□□□□□ -0.16
RFX3P48380 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.03□□□□□ -0.16
RFX3P48380 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.03□□□□□ -0.16
RFX3P48380 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.03□□□□□ -0.16
RFX3P48380 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.03□□□□□ -0.16
RFX3P48380 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.03□□□□□ -0.16
RFX3P48380 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.03□□□□□ -0.16
RFX3P48380 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.03□□□□□ -0.16
RFX3P48380 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.03□□□□□ -0.16
RFX3P48380 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 AP005019.2-201ENST00000615104 511 ntBASIC14.03□□□□□ -0.16
RFX3P48380 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.03□□□□□ -0.16
RFX3P48380 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.03□□□□□ -0.16
RFX3P48380 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 KRT8P35-201ENST00000483942 1338 ntBASIC14.03□□□□□ -0.16
RFX3P48380 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RFX3P48380 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RFX3P48380 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.03□□□□□ -0.16
RFX3P48380 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.03□□□□□ -0.16
RFX3P48380 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RFX3P48380 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.03□□□□□ -0.16
RFX3P48380 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.03□□□□□ -0.16
RFX3P48380 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFX3P48380 REXO1L1P-201ENST00000379010 6598 ntBASIC14.02□□□□□ -0.16
RFX3P48380 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.02□□□□□ -0.16
RFX3P48380 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.02□□□□□ -0.16
RFX3P48380 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RFX3P48380 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 FP325330.2-201ENST00000624219 5630 ntBASIC14.02□□□□□ -0.16
RFX3P48380 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.02□□□□□ -0.16
RFX3P48380 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.02□□□□□ -0.16
RFX3P48380 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.02□□□□□ -0.16
RFX3P48380 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 KRT8P14-201ENST00000414254 1442 ntBASIC14.02□□□□□ -0.16
RFX3P48380 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.02□□□□□ -0.16
RFX3P48380 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFX3P48380 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFX3P48380 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFX3P48380 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFX3P48380 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RFX3P48380 AC098614.1-201ENST00000368528 745 ntBASIC14.02□□□□□ -0.17
RFX3P48380 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFX3P48380 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RFX3P48380 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.02□□□□□ -0.17
RFX3P48380 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFX3P48380 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.02□□□□□ -0.17
RFX3P48380 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.02□□□□□ -0.17
RFX3P48380 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.02□□□□□ -0.17
RFX3P48380 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.02□□□□□ -0.17
RFX3P48380 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.02□□□□□ -0.17
RFX3P48380 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFX3P48380 INE1-201ENST00000456273 945 ntBASIC14.02□□□□□ -0.17
RFX3P48380 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.02□□□□□ -0.17
RFX3P48380 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
RFX3P48380 PTP4A1P2-201ENST00000546033 454 ntBASIC14.02□□□□□ -0.17
RFX3P48380 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.02□□□□□ -0.17
RFX3P48380 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.02□□□□□ -0.17
RFX3P48380 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.02□□□□□ -0.17
RFX3P48380 AC009486.1-201ENST00000569860 813 ntBASIC14.02□□□□□ -0.17
RFX3P48380 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.02□□□□□ -0.17
RFX3P48380 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.02□□□□□ -0.17
RFX3P48380 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFX3P48380 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.02□□□□□ -0.17
RFX3P48380 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFX3P48380 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms