Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
NKX2-1P43699 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
NKX2-1P43699 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
NKX2-1P43699 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
NKX2-1P43699 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.21□□□□□ -0.45
NKX2-1P43699 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX2-1P43699 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX2-1P43699 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
NKX2-1P43699 TOMM22P5-201ENST00000416399 439 ntBASIC12.21□□□□□ -0.45
NKX2-1P43699 AC023274.1-201ENST00000418278 595 ntBASIC12.21□□□□□ -0.45
NKX2-1P43699 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX2-1P43699 ACTG1P14-201ENST00000446382 1122 ntBASIC12.21□□□□□ -0.45
NKX2-1P43699 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
NKX2-1P43699 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.21□□□□□ -0.45
NKX2-1P43699 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.21□□□□□ -0.45
NKX2-1P43699 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.21□□□□□ -0.45
NKX2-1P43699 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 AC025048.3-201ENST00000590609 569 ntBASIC12.21□□□□□ -0.45
NKX2-1P43699 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
NKX2-1P43699 AC005702.4-201ENST00000618393 416 ntBASIC12.21□□□□□ -0.45
NKX2-1P43699 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.21□□□□□ -0.45
NKX2-1P43699 AF228730.6-201ENST00000641497 218 ntBASIC12.21□□□□□ -0.45
NKX2-1P43699 AC084121.3-201ENST00000641716 218 ntBASIC12.21□□□□□ -0.45
NKX2-1P43699 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.21□□□□□ -0.45
NKX2-1P43699 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NKX2-1P43699 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NKX2-1P43699 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
NKX2-1P43699 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
NKX2-1P43699 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NKX2-1P43699 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
NKX2-1P43699 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NKX2-1P43699 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NKX2-1P43699 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
NKX2-1P43699 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.21□□□□□ -0.46
NKX2-1P43699 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
NKX2-1P43699 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.21□□□□□ -0.46
NKX2-1P43699 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.21□□□□□ -0.46
NKX2-1P43699 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
NKX2-1P43699 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.21□□□□□ -0.46
NKX2-1P43699 AL137783.1-201ENST00000623494 1896 ntBASIC12.21□□□□□ -0.46
NKX2-1P43699 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NKX2-1P43699 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
NKX2-1P43699 AC015909.5-201ENST00000624336 2266 ntBASIC12.2□□□□□ -0.46
NKX2-1P43699 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NKX2-1P43699 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 AC004832.2-201ENST00000426397 482 ntBASIC12.2□□□□□ -0.46
NKX2-1P43699 RPL13P2-201ENST00000440687 659 ntBASIC12.2□□□□□ -0.46
NKX2-1P43699 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.2□□□□□ -0.46
NKX2-1P43699 SERBP1P3-201ENST00000459980 809 ntBASIC12.2□□□□□ -0.46
NKX2-1P43699 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.2□□□□□ -0.46
NKX2-1P43699 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.2□□□□□ -0.46
NKX2-1P43699 MTDHP5-201ENST00000598980 586 ntBASIC12.2□□□□□ -0.46
NKX2-1P43699 LINC00628-201ENST00000628516 1289 ntBASIC12.2□□□□□ -0.46
NKX2-1P43699 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.2□□□□□ -0.46
NKX2-1P43699 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.2□□□□□ -0.46
NKX2-1P43699 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
NKX2-1P43699 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.2□□□□□ -0.46
NKX2-1P43699 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX2-1P43699 FAM90A12P-201ENST00000519497 2375 ntBASIC12.2□□□□□ -0.46
NKX2-1P43699 FAM90A24P-201ENST00000520792 2369 ntBASIC12.2□□□□□ -0.46
NKX2-1P43699 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.2□□□□□ -0.46
NKX2-1P43699 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms