Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SSR1P43307 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 AC007541.1-201ENST00000570282 1469 ntBASIC15.9■□□□□ 0.14
SSR1P43307 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.9■□□□□ 0.14
SSR1P43307 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SSR1P43307 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SSR1P43307 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SSR1P43307 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSR1P43307 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SSR1P43307 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SSR1P43307 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SSR1P43307 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 SLC7A15P-201ENST00000424028 1363 ntBASIC15.89■□□□□ 0.13
SSR1P43307 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 MIR193BHG-211ENST00000641433 5365 ntBASIC15.89■□□□□ 0.13
SSR1P43307 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 MIR770-201ENST00000390219 98 ntBASIC15.89■□□□□ 0.13
SSR1P43307 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.89■□□□□ 0.13
SSR1P43307 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.89■□□□□ 0.13
SSR1P43307 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.89■□□□□ 0.13
SSR1P43307 RRP7BP-205ENST00000566851 833 ntBASIC15.89■□□□□ 0.13
SSR1P43307 AC027796.2-201ENST00000575326 344 ntBASIC15.89■□□□□ 0.13
SSR1P43307 SPDYE22P-201ENST00000582158 798 ntBASIC15.89■□□□□ 0.13
SSR1P43307 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 AC007431.3-201ENST00000623221 587 ntBASIC15.89■□□□□ 0.13
SSR1P43307 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 AC113367.3-201ENST00000508316 1912 ntBASIC15.89■□□□□ 0.13
SSR1P43307 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.89■□□□□ 0.13
SSR1P43307 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SSR1P43307 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSR1P43307 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSR1P43307 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.88■□□□□ 0.13
SSR1P43307 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.88■□□□□ 0.13
SSR1P43307 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SSR1P43307 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.88■□□□□ 0.13
SSR1P43307 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.88■□□□□ 0.13
SSR1P43307 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SSR1P43307 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SSR1P43307 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSR1P43307 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.88■□□□□ 0.13
SSR1P43307 TSPY16P-201ENST00000449843 468 ntBASIC15.88■□□□□ 0.13
SSR1P43307 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms