Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A2P43004 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
SLC1A2P43004 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A2P43004 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A2P43004 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A2P43004 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A2P43004 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A2P43004 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC1A2P43004 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.77□□□□□ -0.04
SLC1A2P43004 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SLC1A2P43004 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A2P43004 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC1A2P43004 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A2P43004 AC011498.7-201ENST00000624986 2027 ntBASIC14.77□□□□□ -0.04
SLC1A2P43004 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A2P43004 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.77□□□□□ -0.04
SLC1A2P43004 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SLC1A2P43004 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC1A2P43004 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC1A2P43004 AL355864.2-201ENST00000447420 863 ntBASIC14.77□□□□□ -0.05
SLC1A2P43004 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC1A2P43004 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC1A2P43004 RN7SL752P-201ENST00000463779 287 ntBASIC14.77□□□□□ -0.05
SLC1A2P43004 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC1A2P43004 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SLC1A2P43004 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.77□□□□□ -0.05
SLC1A2P43004 ECM1P1-201ENST00000604092 1279 ntBASIC14.77□□□□□ -0.05
SLC1A2P43004 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SLC1A2P43004 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SLC1A2P43004 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SLC1A2P43004 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SLC1A2P43004 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC1A2P43004 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLC1A2P43004 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SLC1A2P43004 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SLC1A2P43004 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
SLC1A2P43004 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A2P43004 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 AL365209.1-201ENST00000624418 6473 ntBASIC14.76□□□□□ -0.05
SLC1A2P43004 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC1A2P43004 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
SLC1A2P43004 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SLC1A2P43004 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC1A2P43004 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.76□□□□□ -0.05
SLC1A2P43004 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SLC1A2P43004 AC098614.1-201ENST00000368528 745 ntBASIC14.76□□□□□ -0.05
SLC1A2P43004 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SLC1A2P43004 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SLC1A2P43004 AC103988.2-201ENST00000561804 725 ntBASIC14.76□□□□□ -0.05
SLC1A2P43004 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.76□□□□□ -0.05
SLC1A2P43004 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.76□□□□□ -0.05
SLC1A2P43004 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.76□□□□□ -0.05
SLC1A2P43004 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.76□□□□□ -0.05
SLC1A2P43004 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SLC1A2P43004 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms