Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC004945.1-201ENST00000416738 983 ntBASIC13.64□□□□□ -0.23
RFC3P40938 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RFC3P40938 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RFC3P40938 CHMP1AP1-201ENST00000445563 662 ntBASIC13.64□□□□□ -0.23
RFC3P40938 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.64□□□□□ -0.23
RFC3P40938 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.64□□□□□ -0.23
RFC3P40938 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.64□□□□□ -0.23
RFC3P40938 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFC3P40938 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RFC3P40938 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.64□□□□□ -0.23
RFC3P40938 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RFC3P40938 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RFC3P40938 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RFC3P40938 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.64□□□□□ -0.23
RFC3P40938 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.64□□□□□ -0.23
RFC3P40938 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.64□□□□□ -0.23
RFC3P40938 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFC3P40938 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFC3P40938 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFC3P40938 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFC3P40938 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFC3P40938 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RFC3P40938 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.64□□□□□ -0.23
RFC3P40938 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RFC3P40938 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFC3P40938 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RFC3P40938 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RFC3P40938 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RFC3P40938 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 AL136309.1-201ENST00000403917 691 ntBASIC13.63□□□□□ -0.23
RFC3P40938 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.63□□□□□ -0.23
RFC3P40938 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.63□□□□□ -0.23
RFC3P40938 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.63□□□□□ -0.23
RFC3P40938 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.63□□□□□ -0.23
RFC3P40938 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.63□□□□□ -0.23
RFC3P40938 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.63□□□□□ -0.23
RFC3P40938 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.63□□□□□ -0.23
RFC3P40938 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.63□□□□□ -0.23
RFC3P40938 AL136301.1-201ENST00000615830 422 ntBASIC13.63□□□□□ -0.23
RFC3P40938 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RFC3P40938 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RFC3P40938 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
RFC3P40938 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFC3P40938 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.63□□□□□ -0.23
RFC3P40938 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.62□□□□□ -0.23
RFC3P40938 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RFC3P40938 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RFC3P40938 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RFC3P40938 AC023157.3-201ENST00000619086 2088 ntBASIC13.62□□□□□ -0.23
RFC3P40938 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RFC3P40938 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms