Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
PDE6BP35913 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PDE6BP35913 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDE6BP35913 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PDE6BP35913 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.02■□□□□ 0.48
PDE6BP35913 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.02■□□□□ 0.48
PDE6BP35913 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.02■□□□□ 0.48
PDE6BP35913 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.02■□□□□ 0.48
PDE6BP35913 AC139712.1-201ENST00000378256 1875 ntBASIC18.02■□□□□ 0.48
PDE6BP35913 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 MIR645-201ENST00000385283 94 ntBASIC18.02■□□□□ 0.48
PDE6BP35913 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.02■□□□□ 0.48
PDE6BP35913 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC18.02■□□□□ 0.48
PDE6BP35913 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.02■□□□□ 0.48
PDE6BP35913 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PDE6BP35913 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.02■□□□□ 0.48
PDE6BP35913 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.02■□□□□ 0.48
PDE6BP35913 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDE6BP35913 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.02■□□□□ 0.48
PDE6BP35913 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC18.02■□□□□ 0.48
PDE6BP35913 AL591471.1-201ENST00000621855 229 ntBASIC18.02■□□□□ 0.48
PDE6BP35913 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.02■□□□□ 0.48
PDE6BP35913 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PDE6BP35913 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6BP35913 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PDE6BP35913 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.02■□□□□ 0.47
PDE6BP35913 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.02■□□□□ 0.47
PDE6BP35913 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6BP35913 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6BP35913 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDE6BP35913 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PDE6BP35913 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PDE6BP35913 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.01■□□□□ 0.47
PDE6BP35913 SSR4P1-203ENST00000599569 2260 ntBASIC18.01■□□□□ 0.47
PDE6BP35913 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
PDE6BP35913 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PDE6BP35913 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PDE6BP35913 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6BP35913 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.01■□□□□ 0.47
PDE6BP35913 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.01■□□□□ 0.47
PDE6BP35913 AQP7P5-201ENST00000428759 1049 ntBASIC18.01■□□□□ 0.47
PDE6BP35913 AQP7P4-201ENST00000447083 1042 ntBASIC18.01■□□□□ 0.47
PDE6BP35913 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6BP35913 AQP7P2-201ENST00000453967 1041 ntBASIC18.01■□□□□ 0.47
PDE6BP35913 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC18.01■□□□□ 0.47
PDE6BP35913 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6BP35913 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6BP35913 AC068867.1-201ENST00000559855 150 ntBASIC18.01■□□□□ 0.47
PDE6BP35913 RN7SL665P-201ENST00000578793 300 ntBASIC18.01■□□□□ 0.47
PDE6BP35913 RN7SL357P-201ENST00000581065 298 ntBASIC18.01■□□□□ 0.47
PDE6BP35913 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6BP35913 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.01■□□□□ 0.47
PDE6BP35913 AC011471.3-201ENST00000623576 402 ntBASIC18.01■□□□□ 0.47
PDE6BP35913 AQP7P3-201ENST00000624547 1041 ntBASIC18.01■□□□□ 0.47
PDE6BP35913 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6BP35913 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PDE6BP35913 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.01■□□□□ 0.47
PDE6BP35913 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
PDE6BP35913 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDE6BP35913 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18■□□□□ 0.47
PDE6BP35913 AC112693.3-201ENST00000624819 1983 ntBASIC18■□□□□ 0.47
PDE6BP35913 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18■□□□□ 0.47
PDE6BP35913 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PDE6BP35913 C18orf15-201ENST00000623680 2534 ntBASIC18■□□□□ 0.47
PDE6BP35913 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 AC021305.1-201ENST00000520656 1514 ntBASIC18■□□□□ 0.47
PDE6BP35913 AC006372.4-201ENST00000624122 1543 ntBASIC18■□□□□ 0.47
PDE6BP35913 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18■□□□□ 0.47
PDE6BP35913 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDE6BP35913 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms