Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RFC1P35251 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.66■□□□□ 0.1
RFC1P35251 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC1P35251 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.66■□□□□ 0.1
RFC1P35251 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.66■□□□□ 0.1
RFC1P35251 TPT1P11-201ENST00000458482 498 ntBASIC15.66■□□□□ 0.1
RFC1P35251 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.66■□□□□ 0.1
RFC1P35251 AL391280.1-201ENST00000506969 1062 ntBASIC15.66■□□□□ 0.1
RFC1P35251 AC131206.1-201ENST00000538078 1211 ntBASIC15.66■□□□□ 0.1
RFC1P35251 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RFC1P35251 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RFC1P35251 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RFC1P35251 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC1P35251 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 AC015802.1-201ENST00000588104 1449 ntBASIC15.66■□□□□ 0.1
RFC1P35251 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC1P35251 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RFC1P35251 FKBP4P6-201ENST00000457486 1332 ntBASIC15.66■□□□□ 0.1
RFC1P35251 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 PTENP1-202ENST00000532280 3996 ntBASIC15.66■□□□□ 0.1
RFC1P35251 AC117489.1-201ENST00000625169 3217 ntBASIC15.66■□□□□ 0.1
RFC1P35251 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC1P35251 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RFC1P35251 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC1P35251 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC1P35251 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC1P35251 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC1P35251 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC1P35251 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 TPM3P8-201ENST00000330554 643 ntBASIC15.65■□□□□ 0.1
RFC1P35251 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RFC1P35251 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC1P35251 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RFC1P35251 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RFC1P35251 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.65■□□□□ 0.1
RFC1P35251 FTH1P14-201ENST00000482930 551 ntBASIC15.65■□□□□ 0.1
RFC1P35251 FTLP10-202ENST00000505798 471 ntBASIC15.65■□□□□ 0.1
RFC1P35251 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC1P35251 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.65■□□□□ 0.1
RFC1P35251 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC1P35251 ECM1P1-201ENST00000604092 1279 ntBASIC15.65■□□□□ 0.1
RFC1P35251 LINC02084-201ENST00000606069 1096 ntBASIC15.65■□□□□ 0.1
RFC1P35251 AL022328.1-201ENST00000610050 478 ntBASIC15.65■□□□□ 0.1
RFC1P35251 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC1P35251 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC1P35251 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC1P35251 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
RFC1P35251 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.64■□□□□ 0.09
RFC1P35251 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
RFC1P35251 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.64■□□□□ 0.09
RFC1P35251 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RFC1P35251 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFC1P35251 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms