Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 KLF2P3-201ENST00000451977 1087 ntBASIC14.48□□□□□ -0.09
EPHA3P29320 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.48□□□□□ -0.09
EPHA3P29320 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.48□□□□□ -0.09
EPHA3P29320 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.48□□□□□ -0.09
EPHA3P29320 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.48□□□□□ -0.09
EPHA3P29320 AC092865.5-201ENST00000545435 363 ntBASIC14.48□□□□□ -0.09
EPHA3P29320 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA3P29320 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.48□□□□□ -0.09
EPHA3P29320 DUX4L47-201ENST00000566374 394 ntBASIC14.48□□□□□ -0.09
EPHA3P29320 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.48□□□□□ -0.09
EPHA3P29320 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA3P29320 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.48□□□□□ -0.09
EPHA3P29320 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA3P29320 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.48□□□□□ -0.09
EPHA3P29320 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
EPHA3P29320 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA3P29320 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
EPHA3P29320 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA3P29320 AC011498.7-201ENST00000624986 2027 ntBASIC14.48□□□□□ -0.09
EPHA3P29320 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
EPHA3P29320 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 AC111170.3-201ENST00000624282 2464 ntBASIC14.47□□□□□ -0.09
EPHA3P29320 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.47□□□□□ -0.09
EPHA3P29320 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.47□□□□□ -0.09
EPHA3P29320 AC092580.3-201ENST00000430932 139 ntBASIC14.47□□□□□ -0.09
EPHA3P29320 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.47□□□□□ -0.09
EPHA3P29320 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.47□□□□□ -0.09
EPHA3P29320 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.47□□□□□ -0.09
EPHA3P29320 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.47□□□□□ -0.09
EPHA3P29320 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.47□□□□□ -0.09
EPHA3P29320 AC005562.1-201ENST00000583030 3219 ntBASIC14.47□□□□□ -0.09
EPHA3P29320 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 AC100757.3-201ENST00000622361 1406 ntBASIC14.47□□□□□ -0.09
EPHA3P29320 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.47□□□□□ -0.09
EPHA3P29320 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
EPHA3P29320 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
EPHA3P29320 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.47□□□□□ -0.09
EPHA3P29320 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
EPHA3P29320 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.46□□□□□ -0.09
EPHA3P29320 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
EPHA3P29320 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.46□□□□□ -0.09
EPHA3P29320 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
EPHA3P29320 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.46□□□□□ -0.09
EPHA3P29320 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
EPHA3P29320 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.46□□□□□ -0.09
EPHA3P29320 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
EPHA3P29320 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
EPHA3P29320 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.46□□□□□ -0.09
EPHA3P29320 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
EPHA3P29320 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
EPHA3P29320 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
EPHA3P29320 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms