Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RARAP10276 AC098614.1-201ENST00000368528 745 ntBASIC15.58■□□□□ 0.08
RARAP10276 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RARAP10276 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.58■□□□□ 0.08
RARAP10276 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.58■□□□□ 0.08
RARAP10276 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.58■□□□□ 0.08
RARAP10276 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.58■□□□□ 0.08
RARAP10276 RN7SL837P-201ENST00000463010 287 ntBASIC15.58■□□□□ 0.08
RARAP10276 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.58■□□□□ 0.08
RARAP10276 AC068587.3-201ENST00000526613 355 ntBASIC15.58■□□□□ 0.08
RARAP10276 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.58■□□□□ 0.08
RARAP10276 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.58■□□□□ 0.08
RARAP10276 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RARAP10276 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RARAP10276 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.58■□□□□ 0.08
RARAP10276 AC090505.1-201ENST00000430515 1834 ntBASIC15.58■□□□□ 0.08
RARAP10276 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RARAP10276 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RARAP10276 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RARAP10276 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RARAP10276 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.58■□□□□ 0.08
RARAP10276 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RARAP10276 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RARAP10276 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.58■□□□□ 0.08
RARAP10276 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RARAP10276 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RARAP10276 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.58■□□□□ 0.08
RARAP10276 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RARAP10276 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RARAP10276 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
RARAP10276 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 AL138709.1-201ENST00000614840 1693 ntBASIC15.57■□□□□ 0.08
RARAP10276 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.57■□□□□ 0.08
RARAP10276 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.57■□□□□ 0.08
RARAP10276 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RARAP10276 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 TLE1P1-201ENST00000422965 589 ntBASIC15.57■□□□□ 0.08
RARAP10276 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.57■□□□□ 0.08
RARAP10276 RN7SL752P-201ENST00000463779 287 ntBASIC15.57■□□□□ 0.08
RARAP10276 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.57■□□□□ 0.08
RARAP10276 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.57■□□□□ 0.08
RARAP10276 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RARAP10276 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RARAP10276 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 AL359881.3-201ENST00000602640 1721 ntBASIC15.57■□□□□ 0.08
RARAP10276 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RARAP10276 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RARAP10276 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RARAP10276 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RARAP10276 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.56■□□□□ 0.08
RARAP10276 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RARAP10276 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.56■□□□□ 0.08
RARAP10276 POM121L8P-201ENST00000417732 1281 ntBASIC15.56■□□□□ 0.08
RARAP10276 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.56■□□□□ 0.08
RARAP10276 POM121L9P-203ENST00000441984 1285 ntBASIC15.56■□□□□ 0.08
RARAP10276 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms