Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN9O95484 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 FTLP10-202ENST00000505798 471 ntBASIC14.36□□□□□ -0.11
CLDN9O95484 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN9O95484 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN9O95484 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.36□□□□□ -0.11
CLDN9O95484 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN9O95484 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN9O95484 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN9O95484 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CLDN9O95484 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLDN9O95484 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN9O95484 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN9O95484 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLDN9O95484 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLDN9O95484 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 AL138709.1-201ENST00000614840 1693 ntBASIC14.36□□□□□ -0.11
CLDN9O95484 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN9O95484 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN9O95484 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN9O95484 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN9O95484 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN9O95484 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN9O95484 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN9O95484 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLDN9O95484 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLDN9O95484 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.35□□□□□ -0.11
CLDN9O95484 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN9O95484 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN9O95484 MIR6074-201ENST00000612054 107 ntBASIC14.35□□□□□ -0.11
CLDN9O95484 RPSAP52-203ENST00000622976 1023 ntBASIC14.35□□□□□ -0.11
CLDN9O95484 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN9O95484 AC090505.1-201ENST00000430515 1834 ntBASIC14.35□□□□□ -0.11
CLDN9O95484 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN9O95484 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN9O95484 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 AC020910.5-201ENST00000623668 1865 ntBASIC14.35□□□□□ -0.11
CLDN9O95484 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 FKBP4P6-201ENST00000457486 1332 ntBASIC14.35□□□□□ -0.11
CLDN9O95484 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLDN9O95484 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN9O95484 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN9O95484 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN9O95484 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN9O95484 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN9O95484 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN9O95484 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLDN9O95484 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN9O95484 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN9O95484 AL928921.2-201ENST00000641325 2442 ntBASIC14.34□□□□□ -0.11
CLDN9O95484 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms