Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL5O76039 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDKL5O76039 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL5O76039 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.24■□□□□ 0.35
CDKL5O76039 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL5O76039 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CDKL5O76039 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL5O76039 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.24■□□□□ 0.35
CDKL5O76039 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CDKL5O76039 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL5O76039 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.24■□□□□ 0.35
CDKL5O76039 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.24■□□□□ 0.35
CDKL5O76039 AC078819.1-201ENST00000547454 765 ntBASIC17.24■□□□□ 0.35
CDKL5O76039 AC012085.1-201ENST00000548270 765 ntBASIC17.24■□□□□ 0.35
CDKL5O76039 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL5O76039 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.24■□□□□ 0.35
CDKL5O76039 AC103988.2-201ENST00000561804 725 ntBASIC17.24■□□□□ 0.35
CDKL5O76039 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL5O76039 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL5O76039 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDKL5O76039 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.24■□□□□ 0.35
CDKL5O76039 AC244669.2-201ENST00000612320 853 ntBASIC17.24■□□□□ 0.35
CDKL5O76039 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDKL5O76039 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 AC139712.1-201ENST00000378256 1875 ntBASIC17.24■□□□□ 0.35
CDKL5O76039 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDKL5O76039 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDKL5O76039 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.24■□□□□ 0.35
CDKL5O76039 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.24■□□□□ 0.35
CDKL5O76039 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL5O76039 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL5O76039 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL5O76039 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL5O76039 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDKL5O76039 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 AC004945.1-201ENST00000416738 983 ntBASIC17.23■□□□□ 0.35
CDKL5O76039 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL5O76039 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL5O76039 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL5O76039 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.23■□□□□ 0.35
CDKL5O76039 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL5O76039 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CDKL5O76039 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDKL5O76039 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL5O76039 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL5O76039 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CDKL5O76039 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
CDKL5O76039 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL5O76039 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL5O76039 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL5O76039 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDKL5O76039 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDKL5O76039 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL5O76039 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL5O76039 AC009093.2-202ENST00000620513 2079 ntBASIC17.22■□□□□ 0.35
CDKL5O76039 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms