Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.09□□□□□ -0.15
SCN2BO60939 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SCN2BO60939 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.09□□□□□ -0.15
SCN2BO60939 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.09□□□□□ -0.15
SCN2BO60939 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 RN7SL832P-201ENST00000607781 1756 ntBASIC14.09□□□□□ -0.15
SCN2BO60939 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SCN2BO60939 AL391825.1-201ENST00000457671 1364 ntBASIC14.09□□□□□ -0.15
SCN2BO60939 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN2BO60939 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SCN2BO60939 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SCN2BO60939 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
SCN2BO60939 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SCN2BO60939 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SCN2BO60939 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SCN2BO60939 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SCN2BO60939 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.08□□□□□ -0.16
SCN2BO60939 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SCN2BO60939 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.08□□□□□ -0.16
SCN2BO60939 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.08□□□□□ -0.16
SCN2BO60939 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.08□□□□□ -0.16
SCN2BO60939 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SCN2BO60939 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.08□□□□□ -0.16
SCN2BO60939 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.08□□□□□ -0.16
SCN2BO60939 CYMP-203ENST00000474680 1263 ntBASIC14.08□□□□□ -0.16
SCN2BO60939 ELK1P1-201ENST00000485699 580 ntBASIC14.08□□□□□ -0.16
SCN2BO60939 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SCN2BO60939 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.08□□□□□ -0.16
SCN2BO60939 ENPP7P5-201ENST00000541031 1031 ntBASIC14.08□□□□□ -0.16
SCN2BO60939 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.08□□□□□ -0.16
SCN2BO60939 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.08□□□□□ -0.16
SCN2BO60939 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.08□□□□□ -0.16
SCN2BO60939 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.08□□□□□ -0.16
SCN2BO60939 AC133539.2-201ENST00000604757 467 ntBASIC14.08□□□□□ -0.16
SCN2BO60939 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SCN2BO60939 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SCN2BO60939 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.08□□□□□ -0.16
SCN2BO60939 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.08□□□□□ -0.16
SCN2BO60939 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 MRPL37P1-201ENST00000592451 1337 ntBASIC14.08□□□□□ -0.16
SCN2BO60939 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SCN2BO60939 CICP16-201ENST00000502609 2813 ntBASIC14.08□□□□□ -0.16
SCN2BO60939 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SCN2BO60939 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCN2BO60939 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SCN2BO60939 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 AC011840.2-201ENST00000563063 1520 ntBASIC14.07□□□□□ -0.16
SCN2BO60939 LRRC59-203ENST00000576448 1531 ntBASIC14.07□□□□□ -0.16
SCN2BO60939 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 AC215219.1-201ENST00000400706 1817 ntBASIC14.07□□□□□ -0.16
SCN2BO60939 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 INGX-202ENST00000489074 768 ntBASIC14.07□□□□□ -0.16
SCN2BO60939 AC022137.2-201ENST00000503482 481 ntBASIC14.07□□□□□ -0.16
SCN2BO60939 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 API5-211ENST00000534695 560 ntTSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 AC027796.2-201ENST00000575326 344 ntBASIC14.07□□□□□ -0.16
SCN2BO60939 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 AL132655.2-201ENST00000596276 594 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms