Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.58■□□□□ 0.08
OPHN1O60890 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 AC007191.1-201ENST00000623179 2995 ntBASIC15.58■□□□□ 0.08
OPHN1O60890 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
OPHN1O60890 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
OPHN1O60890 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
OPHN1O60890 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
OPHN1O60890 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
OPHN1O60890 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 AL158070.2-201ENST00000623713 1621 ntBASIC15.57■□□□□ 0.08
OPHN1O60890 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.57■□□□□ 0.08
OPHN1O60890 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.57■□□□□ 0.08
OPHN1O60890 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
OPHN1O60890 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 AL157414.3-201ENST00000624276 1954 ntBASIC15.57■□□□□ 0.08
OPHN1O60890 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 INTS4P2-202ENST00000614726 2019 ntBASIC15.57■□□□□ 0.08
OPHN1O60890 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 AC018442.1-201ENST00000421439 2061 ntBASIC15.57■□□□□ 0.08
OPHN1O60890 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.57■□□□□ 0.08
OPHN1O60890 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.57■□□□□ 0.08
OPHN1O60890 GPAA1P2-201ENST00000417923 928 ntBASIC15.57■□□□□ 0.08
OPHN1O60890 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 AC016694.1-201ENST00000434179 700 ntBASIC15.57■□□□□ 0.08
OPHN1O60890 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.57■□□□□ 0.08
OPHN1O60890 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.57■□□□□ 0.08
OPHN1O60890 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.57■□□□□ 0.08
OPHN1O60890 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.57■□□□□ 0.08
OPHN1O60890 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.57■□□□□ 0.08
OPHN1O60890 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.57■□□□□ 0.08
OPHN1O60890 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.57■□□□□ 0.08
OPHN1O60890 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.57■□□□□ 0.08
OPHN1O60890 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
OPHN1O60890 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
OPHN1O60890 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
OPHN1O60890 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 AC117489.1-201ENST00000625169 3217 ntBASIC15.56■□□□□ 0.08
OPHN1O60890 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
OPHN1O60890 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
OPHN1O60890 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.56■□□□□ 0.08
OPHN1O60890 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
OPHN1O60890 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.56■□□□□ 0.08
OPHN1O60890 BAATP1-201ENST00000412284 1225 ntBASIC15.56■□□□□ 0.08
OPHN1O60890 NUS1P3-201ENST00000423502 862 ntBASIC15.56■□□□□ 0.08
OPHN1O60890 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.56■□□□□ 0.08
OPHN1O60890 HLA-K-203ENST00000430151 1046 ntBASIC15.56■□□□□ 0.08
OPHN1O60890 FTH1P14-201ENST00000482930 551 ntBASIC15.56■□□□□ 0.08
OPHN1O60890 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.56■□□□□ 0.08
OPHN1O60890 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
OPHN1O60890 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.56■□□□□ 0.08
OPHN1O60890 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms